ISI-SPIKE & SPIKE-Synchronization articles

Articles that apply ISI, SPIKE, SPIKE-Synchronization and SPIKE-Order

[138] Hu M, Frega M, Tolner EA, van den Maagdenberg AM, Frimat JP, le Feber J:

MEA-ToolBox: an Open Source Toolbox for Standardized Analysis of Multi-Electrode Array Data.

Neuroinformatics. Jun 9:1-6 (2022) (ISI-Distance)


[137] Peng L, Tang J, Ma J, Luo J:

The influence of autapse on synchronous firing in small-world neural networks.

Physica A 126956 (2022) (SPIKE-Distance)


[136] Iredale JA, Stoddard JG, Drury HR, Browne TJ, Elton A, Madden JF, Callister RJ, Welsh JS, Graham BA:

Recording Network Activity in Spinal Nociceptive Circuits using Microelectrode Arrays.

J Vis Exp Feb 9;180:e62920 (2022) (A-SPIKE-Sync)


[135] Hajati F, Girosi F, Rafiei A:

EISI: Extended inter-spike interval for mental health patients clustering based on mental health services and medications utilisation.

Medical Engineering & Physics. Feb 21:103780 (2022) (extended ISI)


[134] Macias S, Bakshi K, Smotherman M:

Faster repetition rate sharpens the cortical representation of echo streams in echolocating bats.

Eneuro 9(1) (2022) (SPIKE-Synchro, SPIKY)


[133] Peng L, Tang J, Ma J, Luo J:

The influence of autapse on synchronous firing in small-world neural networks.

Physica A: Statistical Mechanics and its Applications:126956 (2022) (SPIKE)


[132] Cecchini G, Scaglione A, Mascaro AL, Checcucci C, Conti E, Adam I, Fanelli D, Livi R, Pavone FS, Kreuz T:

Cortical propagation as a biomarker for recovery after stroke.

PLoS Comput Biol 17: e1008963 (2021) [PDF] and bioRxiv [PDF] (SPIKE-Synchro, SPIKE-Order, cSPIKE)


[131] Qin L, Zhang Y:

A reference spike train-based neurocomputing method for enhanced tactile discrimination of surface roughness

Neural Comp Appl 33:14793 (2021) (ISI, SPIKE, SPIKE-Synchro)


[130] Gal E, Amsalem O, Schindel A, London M, Schuermann F, Markram H, Segev I:

The role of hub neurons in modulating cortical dynamics.

bioRxiv (2021) (SPIKE-Synchro, PySpike)


[129] Lazarevich I, Prokin I, Gutkin B, Kazantsev V:

Neural Activity Classification with Machine Learning Models Trained on Interspike Interval Time-Series Data.

bioRxiv (2021) (ISI, PySpike)


[128] Blackwood EB, Shortal BP, Proekt A:

Weak Coupling Between Spontaneous Local Cortical Activity State Switches Under Anesthesia Leads to Strongly Correlated Global Cortical States.

bioRxiv (2021) (SPIKE-Synchro)


[127] Hilgen G, Kartsaki E, Kartysh V, Cessac B, Sernagor E:

A novel approach to the functional classification of retinal ganglion cells.

BioRxiv (2021) (SPIKE)


[126] Colombi I, Nieus T, Massimini M, Chiappalone M:

Spontaneous and Perturbational Complexity in Cortical Cultures.

Brain Sciences 11(11):1453 (2021). (SPIKE-Synchro, PySpike)


[125] Nocon JC, Gritton HJ, James NM, Han X, Sen K:

PV neurons improve cortical complex scene analysis by enhancing timing-based coding.

bioRxiv (2021) (ISI, SPIKE, RI-SPIKE, cSPIKE)



[124] Neru A, Assisi C:


Theta oscillations gate the transmission of reliable sequences in the medial entorhinal cortex.


ENeuro (2021) (SPIKE, PySpike)


[123] Gainutdinov A:

Method for analyzing the inhibition of cellular signals in the spike train format.

Saratov Fall Meeting 2020: Computations and Data Analysis: from Molecular Processes to Brain Functions (2021) (SPIKE-Order)


[122] Enright HA, Lam D, Sebastian A, Sales AP, Cadena J, Hum NR, Osburn JJ, Peters SK, Petkus B, Soscia DA, Kulp KS:

Functional and transcriptional characterization of complex neuronal co-cultures.

Scientific reports 10(1):1-4 (2020) (SPIKE, PySpike)


[121] Risi N, Aimar A, Donati E, Solinas S, Indiveri G:

A spike-based neuromorphic architecture of stereo vision.

Frontiers in Neurorobotics 14:93 (2020). (?, PySpike)


[120] Hermiz J, Hossain L, Arneodo EM, Ganji M, Rogers N, Vahidi N, Halgren E, Gentner TQ, Dayeh SA, Gilja V:

Stimulus driven single unit activity from micro-electrocorticography.

Frontiers in Neuroscience 14:55 (2020). (SPIKE)


[119] Gainutdinov A:

Method for measuring differences in the neuronal responses to social stimuli.

IEEE International Conference Nonlinearity, Information and Robotics (NIR, 2020) (SPIKE-Order, PySpike)


[118] Macias S, Bakshi K, Garcia-Rosales F, Hechavarria JC, Smotherman M:

Temporal coding of echo spectral shape in the bat auditory cortex.

PLoS Biology 8(11):e3000831 (2020) (SPIKE-Synchro, SPIKY)


[117] Amichi L, Viana AC, Crovella M, Loureiro AA:

Understanding individuals' proclivity for novelty seeking.

Proceedings of the 28th International Conference on Advances in Geographic Information Systems (2020) (ISI-Diversity)


[116] Ciba M, Bestel R, Nick C, de Arruda GF, Peron T, Henrique CC, Costa LD, Rodrigues FA, Thielemann C:

Comparison of Different Spike Train Synchrony Measures Regarding Their Robustness to Erroneous Data From Bicuculline-Induced Epileptiform Activity.

Neural computation 32(5):887-911 (2020) (A-ISI, A-SPIKE, ARI-SPIKE, A-SPIKE-Synchro)


[115] O’Halloran DM:

Simulation model of CA1 pyramidal neurons reveal opposing roles for the Na+/Ca2+ exchange current and Ca2+-activated K+ current during spike-timing dependent synaptic plasticity.

Plos one, 15(3), e0230327 (2020) (SPIKE-Synchro, PySpike)


[114] Kita K, Albergaria C, Machado AS, Carey MR, Müller M, Delvendahl I:

GluA4 enables associative memory formation by facilitating cerebellar expansion coding.

bioRxiv (2020) (SPIKE-Synchro, PySpike)


[113] Carter J, Rego J, Schwartz D, Bhandawat V, Kim E:

Learning Spiking Neural Network Models of Drosophila Olfaction.

In International Conference on Neuromorphic Systems pp. 1-5 (2020) (ISI-distance)


[112] Gainutdinov A:

Determination of responses to stimuli by the role of signal-triggering neurons in the network.

IEEE 4th Scientific School on Dynamics of Complex Networks and their Application in Intellectual Robotics (DCNAIR, 2020) (SPIKE-Order)


[111] Brill M, Schwab F:

T-Pattern Analysis and Spike Train Dissimilarity for the Analysis of Structure in Blinking Behavior.

Physiology & Behavior, 113163 (2020) (ISI-distance)


[110] Johnson LA, Wang J, Nebeck SD, Zhang J, Johnson MD, Vitek JL:

Direct activation of primary motor cortex during subthalamic but not pallidal deep brain stimulation.

Journal of Neuroscience, 40(10), 2166-2177 (2020) (SPIKE-Synchro)


[109] Kreuz T, Houghton C, Victor JD:

Spike Train Distance

Encycl Comp Neurosci [PDF], DOI: doi.org/10.1007/978-1-4614-7320-6_409-2 (2020) (ISI, SPIKE, SPIKE-Synchro)


[108] Tumulty JS, Royster M, Cruz L:

Columnar grouping preserves synchronization in neuronal networks with distance-dependent time delays

PRE 101, 022408 (2020) (SPIKE)



[107] Yavari F, Amiri M, Rahatabada FN, Faloticoc E, Laschi C:

Spike train analysis in a digital neuromorphic system of cutaneous mechanoreceptor

Neurocomp 379, 343 (2020) (ISI)


[106] Soucy JR, Askaryan J, Diaz D, Koppes AN, Annabi N, Koppes RA:

Glial cells influence cardiac permittivity as evidenced through in vitro and in silico models

Biofabrication 12, 015014 (2020) (SPIKE)


[105] Amsalem O, Eyal G, Rogozinski N, Segev I:

An efficient analytical reduction of detailed nonlinear neuron models

Nature Comm 11, 288 (2020) (ISI, SPIKE-Synchro)


[104] Neru A, Assisi C:

Theta oscillations gate the transmission of reliable sequences in the medial entorhinal cortex

BioArxiv, doi: https://doi.org/10.1101/545822 (2019) (SPIKE, PySpike)


[103] Garg S, Singh D:

Structural features recapitulate collective dynamics of inhibitory networks

BioArxiv, doi: http://dx.doi.org/10.1101/2019.12.17.879726 (2019) (SPIKE-Synchro, PySpike)


[102] Brouns T, Celikel T:

PASER for automated analysis of neural signals recorded in pulsating magnetic fields

BioArxiv, doi: http://dx.doi.org/10.1101/739409 (2019) (cSPIKE)


[101] Sihn D, Kim SP:

A Spike Train Distance Robust to Firing Rate Changes Based on the Earth Mover’s Distance

Front. Comput. Neurosci. 13:82 (2019) (SPIKE, RI-SPIKE)


[100] Melanitis N, Nikita KS:

Biologically-inspired image processing in computational retina models

Comp Biol Med 113, 103399 (2019) (ISI, SPIKE)


[99] Lee S, Jang K:

Regularity of vehicle trips in urban areas

IEEE Intelligent Transportation Systems Conference (2019); DOI: 10.1109/ITSC.2019.8917025 (ISI)


[98] Tomlinson SB, Wong JN, Conrad EC, Kennedy BC, Marsh ED:

Reproducibility of interictal spike propagation in children with refractory epilepsy

Epilepsia 60, 898 (2019) (SPIKE-order)


[97] Bardin JB, Spreemann G, Hess K:

Topological exploration of artificial neuronal network dynamics

Network Neurosci 3, 725 (2019) (SPIKE, SPIKE-Synchro)


[96] Madar AD, Ewell LA, Jones MV:

Temporal pattern separation in hippocampal neurons through multiplexed neural codes

PLoS Comput Biol 15(4): e1006932 (2019) (SPIKE)


[95] Ouyang Q, Wu J, Shao Z, Wu M, Cao Z:

A Python Code for Simulating Single Tactile Receptors and the Spiking Responses of Their Afferents

Front. Neuroinform. 13:27 (2019) (ISI)


[94] Unakafova VA, Gail A:

Comparing Open-Source Toolboxes for Processing and Analysis of Spike and Local Field Potentials Data

Front. Neuroinform. 13:57 (2019) (SPIKY)


[93] Lam D, Enright HA, Cadena J, Peters SK, Sales AP, Osburn JJ, Soscia DA, Kulp KS, Wheeler EK, Fischer NO:

Tissue-specific extracellular matrix accelerates the formation of neural networks and communities in a neuron-glia co-culture on a multi-electrode array.

Scientific Reports, 9, 4159 (2019) (SPIKE)


[92] Bradley JA, Strock CJ:

Screening for Neurotoxicity with Microelectrode Array

Curr Prot Toxicol 79, e67 (2019) (ISI)



[91] Duarte R, Uhlmann M, van den Broek D, Fitz H, Petersson KM, Morrison A:

Encoding symbolic sequences with spiking neural reservoirs

International Joint Conference on Neural Networks (IJCNN) (2018) (ISI, SPIKE, SPIKE-Synchro)


[90] Lama N, Hargreaves A, Stevens B, McGinnity TM:

Spike Train Synchrony Analysis of Neuronal Cultures

International Joint Conference on Neural Networks (IJCNN) 1-8 (2018) (ISI, SPIKE)


[89] Świetlik D, Białowąs J, Kusiak A, Cichońska D:

Memory and forgetting processes with the firing neuron model

Folia Morphol 77, 221 (2018) (ISI, also time-resolved)



[88] Du Y, Liu J, Fu S:

Information Transmitting and Cognition with a Spiking Neural Network Model

Chin Phys Lett 35, 090502 (2018) (ISI)



[87] Bradley JA, Luithardt HH, Metea MR, Strock CJ:

In Vitro Screening for Seizure Liability Using Microelectrode Array Technology

Toxicol Sci 163, 240 (2018) (ISI)


[86] Naudé J, Didienne S, Takillah S, Prévost-Solié C, Maskos U, Faure P:

Acetylcholine-dependent phasic dopamine activity signals exploratory locomotion and choices.

BioRxiv, 242438.(2018) (SPIKE)


[85] Lassus B, Naudé J, Faure P, Guedin D, Von Boxberg Y, La Cour CM, Millan MJ, Peyrin JM:

Glutamatergic and dopaminergic modulation of cortico-striatal circuits probed by dynamic calcium imaging of networks reconstructed in microfluidic chips.

Scientific reports, 8, 1 (2018) (SPIKE-Synchro)


[84] Jouty J, Hilgen G, Sernagor E, Hennig MH:

Non-parametric Physiological Classification of Retinal Ganglion Cells in the Mouse Retina

Front Cell Neurosci 12:481 (2018) (ISI, SPIKE, PySPIKE)


[83] Satuvuori E, Mulansky M, Daffertshofer A, Kreuz T:

Using spike train distances to identify the most discriminative neuronal subpopulation

JNeurosci Methods, 308, 354 [PDF] and arXiv [PDF] (2018) (SPIKE)


[82] Gardella C, Marre O, Mora T:

Blindfold learning of an accurate neural metric.


Proc Nat Ac Sci 201718710 (2018) (ISI, SPIKE, SPIKE-Synchro)




[81] Satuvuori E, Kreuz T:

Which spike train distance is most suitable for distinguishing rate and temporal coding?


JNeurosci Methods 299, 22 [PDF] and arXiv [PDF] (2018) (ISI, SPIKE)




[80] Ciba M, Isomura T, Jimbo Y, Bahmer A, Thielemann C:


Spike-contrast: A novel time scale independent and multivariate measure of spike train synchrony


JNeurosci Methods 293, 136 (2018) (SPIKE)




[79] Yi Z, Zhang Y:


A spike train distance-based method to evaluate the response of mechanoreceptive afferents.


Neural Computing and Applications. 1-12 (2018) (ISI, SPIKE)




[78] Williams MJ, Whitaker RM, Allen SM:


There and back again: Detecting regularity in human encounter communities.


IEEE Transactions on Mobile Computing 16:1744 (2017) (ISI)




[77] Sun AY, Xia Y, Caldwell T, Hao Z:


Patterns of Precipitation and Soil Moisture Extremes in Texas, US: A Complex Network Analysis.


Advances in Water Resources 112, 203 (2017) (SPIKE-Synchro)




[76] Aguirre LA, Portes LL, Letellier C:


Observability and synchronization of neuron models.


Chaos: An Interdisciplinary Journal of Nonlinear Science 27(10):103103 (2017) (SPIKE)




[75] Zhu J, Liu X:


Measuring spike timing distance in the Hindmarsh–Rose neurons


Cogn Neurodyn https://doi.org/10.1007/s11571-017-9466-9 (2017) (ISI)




[74] Madar AD, Ewell LA, Jones MV:


Pattern separation of spike trains by individual granule cells of the dentate gyrus.


bioaRxiv 107706 (2017) (SPIKE)




[73] Malvestio I, Kreuz T, Andrzejak RG:


Robustness and versatility of a nonlinear interdependence method for directional coupling detection from spike trains


Physical Review E 96, 022203 [PDF] (2017) (ISI, SPIKE)




[72] Qi D, Xiao Z, Liu S, Jiao Y:


Spike Trains Synchrony with Changed Neuronal Networks Parameters in a Hippocampus CA3 Small-World Network Model.


Information Science and Control Engineering Proc. 1721 (2017) (ISI)




[71] Palazzolo G, Moroni M, Soloperto A, Aletti G, Naldi G, Vassalli M, Nieus T, Difato F:


Fast wide-volume functional imaging of engineered in vitro brain tissues.


Scientific Reports 7 (2017) (SPIKE-Synchro)




[70] Kreuz T, Satuvuori E, Mulansky M:


SPIKE-order


Scholarpedia, 12(7):42441 (2017) (SPIKE-Synchro, SPIKE-order)




[69] Satuvuori E, Mulansky M, Bozanic N, Malvestio I, Zeldenrust F, Lenk K, Kreuz T:


Measures of spike train synchrony for data with multiple time-scales


JNeurosci Methods 287, 25 [PDF] and arXiv [PDF] (2017) (Introduces adaptive versions of ISI, SPIKE, SPIKE-Synchro)




[68] Kreuz T, Satuvuori E, Pofahl M, Mulansky M:


Leaders and followers: Quantifying consistency in spatio-temporal propagation patterns


New J. Phys., 19, 043028 [PDF] and arXiv [PDF ] (2017) (SPIKE-Synchro, introduces SPIKE-order)




[67] Yi Z, Zhang Y:


Recognizing tactile surface roughness with a biomimetic fingertip: A soft neuromorphic approach.


Neurocomputing 244, 102 (2017) (ISI, SPIKE)




[66] Ravello CR, Escobar MJ, Palacios A, Perrinet LU:


Differential response of the retinal neural code with respect to the sparseness of natural images


Arxiv 1611:06834v1 (2016) (SPIKE)




[65] Kuroda K, Hasegawa M:


Method for Estimating Neural Network Topology Based on SPIKE-Distance


LNCS 9886, 91 (2016) (SPIKE)




[64] Mulansky M, Kreuz T:


PySpike - A Python library for analyzing spike train synchrony


Software X (in press) and arXiv [PDF] (2016) (Python source codes for ISI, SPIKE, SPIKE-Synchro)




[63] Zapata-Fonseca L, Dotov D, Fossion R, Froese T:


Time-Series Analysis of Embodied Interaction: Movement Variability and Complexity Matching As Dyadic Properties.


Frontiers in Psychology, 7 (2016) (SPIKE)



[62] Koutsou A, Kanev J, Economidou M, Christodoulou C:


Integrator or coincidence detector---what shapes the relation of stimulus synchrony and the operational mode of a neuron?


Mathematical Biosciences and Engineering 13,521 (2016) (SPIKE)




[61] Espinal A, Rostro-Gonzalez H, Carpio M, Guerra-Hernandez EI, Ornelas-Rodriguez M, Puga-Soberanes HJ, Sotelo-Figuero MA, Melin P:


Quadrupedal robot locomotion: a biologically inspired approach and its hardware implementation


ComputIntelNeurosci 5615618 (2016) (SPIKE)




[60] Espinal A, Rostro-Gonzalez H, Carpio M, Guerra-Hernandez EI, Ornelas-Rodriguez M, Sotelo-Figuero MA:


Design of Spiking Central Pattern Generators for Multiple Locomotion Gaits in Hexapod Robots by Christiansen Grammar Evolution


Front Neurorobot 10:6 (2016) (SPIKE)




[59] Vlachos I, Deniz T, Aertsen A, Kumar A:


Recovery of dynamics and function in spiking neural networks with closed-loop control


PLoS Comput Biol 12.2, e1004720 (2016) (SPIKE)




[58] Dura-Bernal S, Li K, Neymotin SA, Francis JT, Principe, JC, Lytton WW:


Restoring Behavior via Inverse Neurocontroller in a Lesioned Cortical Spiking Model Driving a Virtual Arm


Frontiers in Neurocience 10:28 (2016) (SPIKE, SPIKE-Synchro)




[57] Rodrigues AC, Cerdeira HA, Machado BS:


The influence of hubs in the structure of a neuronal network during an epileptic seizure


Eur. Phys. J. Special Topics 225, 75 (2016) (SPIKE)




[56] Chen YL, Yu LC, Chen Y:


Reliability of weak signals detection in neurons with noise


Sci China Tech Sci 59, 411 (2016) (ISI)




[55] Qu J, Wang R, Du Y, Yan C:


An Improved Method of Measuring Multiple Spike Train Synchrony.


Ch. 105, R. Wang and X. Pan (eds.), Advances in Cognitive Neurodynamics (V), Springer Science+Business Media Singapore (2016) (ISI)




[54] Hino H, Takano K, Murata N:


mmpp: A Package for Calculating Similarity and Distance Metrics for Simple and Marked Temporal Point Processes.


R Journal 7, 237 (2015) (R source codes for ISI)




[53] Bockhorst T, Homberg U:


Amplitude and dynamics of polarization-plane signaling in the central complex of the locust brain.


Journal of Neurophysiology 113, 3291 (2015) (Variation of ISI)




[52] Takano K, Hino H, Yoshikawa Y, Murata N:


Patchworking multiple pairwise distances for learning with distance matrices.


International Conference on Latent Variable Analysis and Signal Separation 287 (2015) (ISI)




[51] Bockhorst T, Homberg U:


Compass Cells in the Brain of an Insect Are Sensitive to Novel Events in the Visual World


PLoS ONE 10(12):e0144501 (2015) (Variation of ISI)




[50] Qu J, Wang R, Du Y:


Measuring effects of different noises in a model using ISI-distance methods.


Int. J. Biomath. 08, 1550043 (2015) (ISI)




[49] Chew G, Ang KK, So RQ, Xu Z, Guan C:


Combining Firing Rate and Spike-Train Synchrony Features in the Decoding of Motor Cortical Activity


IEEE Engineering in Medicine and Biology Society (EMBC), 1091 (2015) (ISI,SPIKE,SPIKY)




[48] Eisenman LN, Emnett, CM, Mohan J, Zorumski CF, Mennerick S:


Quantification of bursting and synchrony in cultured hippocampal neurons


JNeurophysiol, 114,1059 (2015) (SPIKE)




[47] Du Y, Wang R, Cao J:


Parameter-dependent synchronization of coupled neurons in cold receptor model.


International Journal of Non-Linear Mechanics 70, 95 (2015) (ISI)




[46] Hoang H, Yamashita O, Tokuda IT, Sato M, Kawato M, Toyama K:


Segmental Bayesian estimation of gap-junctional and inhibitory conductance of inferior olive neurons from spike trains with complicated dynamics


Front. Comput. Neurosci. 9:56 (2015) (SPIKE)




[45] Rabinowitch TC, Knafo-Noam A:


Synchronous rhythmic interaction enhances children’s perceived similarity and closeness towards each other.


PLoS ONE 10(4): e0120878 (2015) (old SPIKE, Inter-personal synchronization)




[44] Mulansky M, Bozanic N, Sburlea A, Kreuz T:


A guide to time-resolved and parameter-free measures of spike train synchrony.


IEEE Proceeding on Event-based Control, Communication, and Signal Processing (EBCCSP), 1-8 and arXiv [PDF] (2015) (overview and math. properties ISI, SPIKE, SPIKE-Synchro)




[43] Kreuz T, Mulansky M, Bozanic N:


SPIKY: A graphical user interface for monitoring spike train synchrony.


JNeurophysiol 113, 3432 (2015) [PDF] (ISI, SPIKE, introduces SPIKE-Synchro, SPIKY)




[42] Bozanic N, Mulansky M, Kreuz T:


SPIKY


Scholarpedia 9(12), 32344 (2014) (ISI, SPIKE, SPIKE-Synchro, SPIKY)



[41] Thibeault CM, O'Brien MJ, Srinivasa N:


Analyzing large-scale spiking neural data with HRLAnalysis™.


Frontiers in neuroinformatics, 8, 17 (2014) (SPIKE-Software)




[40] Diego Andilla F, Hamprecht FA:


Sparse Space-Time Deconvolution for Calcium Image Analysis


Advances in Neural Information Processing Systems 27, 64-72 (NIPS 2014) (SPIKE)




[39] Cutts CS, Eglen SJ:


Detecting pairwise correlations in spike trains: An objective comparison of methods and application to the study of retinal waves.


J Neurosci 34, 14288 (2014) (comparison of correlation measures, but also includes SPIKE)




[38] Konstantoudaki X, Papoutsi A, Chalkiadaki K, Poirazi P, Sidiropoulou K:


Modulatory effects of inhibition on Feise activity in a cortical microcircuit model


Front. Neural Circuits 8: 1 (2014) (old SPIKE)




[37] Andrzejak RG, Mormann F, Kreuz T:


Detecting determinism from point processes.


Physical Review E 90, 062906 (2014) [PDF] (ISI, SPIKE)




[36] Sacre P, Sepulchre R:


Sensitivity Analysis of Oscillator Models in the Space of Phase-Response Curves: Oscillators As Open Systems.


Control Systems, IEEE 34, 50 (2014) (SPIKE, also time-resolved)




[35] Du Y, Wang R, Cao J:


Noise and Synchronization Analysis of the Cold-Receptor Neuronal Network Model.


Discrete Dynamics in Nature and Society (Hindawi) 173894 (2014) (ISI)




[34] Xu A, Du Y, Wang R, Cao J:


Interaction between different cells in olfactory bulb and synchronous kinematic analysis.


Discrete Dynamics in Nature and Society (Hindawi) 808792 (2014) (ISI)




[33] Wang J, Liu S, Li X:


Quantification of synchronization phenomena in two reciprocally gap-junction coupled bursting pancreatic beta-cells.


Chaos, Solitons & Fractals 68, 65 (2014) (ISI)




[32] Rusu CV, Florian RV:


A new class of metrics for spike trains


Neural Comput 26, 306 (2014) (ISI, SPIKE, includes performance comparison)




[31] Dipoppa M, Gutkin BS:


Correlations in background activity control persistent state stability and allow execution of working memory tasks.


Front Comput Neurosci. 7: 139 (2013) (SPIKE, including selective averaging)




[30] Qi D, Xiao Z:


Spike Trains Synchrony With Different Coupling Strengths in a Hippocampus CA3 Small-World Network Model.


Proceedings of the 2013 6th International Conference on Biomedical Engineering and Informatics (BMEI 2013) (ISI, also time-resolved)



[29] Papoutsi A, Sidiropoulo K, Cutsuridis V and Poirazi P:


Induction and modulation of persistent activity in a layer VPFC microcircuit model.


Frontiers in Neural Circuits 7, 161 (2013) (old SPIKE)




[28] Chen Y, Zhang H, Wang H, Yu L, Chen Y:


The Role of Coincidence-Detector Neurons in the Reliability and Precision of Subthreshold Signal Detection in Noise.


PLoS ONE 8(2): e56822 (2013) (ISI, also time-resolved)




[27] Kreuz T, Chicharro D, Houghton C, Andrzejak RG, Mormann F:


Monitoring spike train synchrony.


J Neurophysiol 109, 1457 (2013) [PDF] (introduces SPIKE)




[26] Kreuz T:


SPIKE-distance.


Scholarpedia 7(12), 30652 (2012). (SPIKE)




[25] Williams MJ, Whitaker RM, Allen SM:


Measuring individual regularity in human visiting patterns.


Proceedings of the ASE International Conf. on Social Computing, 117 (2012) (multivariate ISI-diversity)




[24] Goulet J, van Hemmen JL, Jung SN, Chagnaud BP, Scholze B, Engelmann J:


Temporal precision and reliability in the velocity regime of a hair-cell sensory system: the mechanosensory lateral line of goldfish, Carassius auratus.


J Neurophysiol 107, 2581 (2012) (ISI)




[23] Mitra A, Manitius A, Sauer T:


Prediction of Single Neuron Spiking Activity using an Optimized Nonlinear Dynamic Model.


IEEE EMBS 2543 (2012) (old SPIKE)




[22] Michmizos KP, Sakas D, Nikita KS:


Parameter identification for a local field potential driven model of the Parkinsonian subthalamic nucleus spike activity.


Neural Networks 36, 146 (2012) (variation of ISI)




[21] Jalili M:


Collective behavior of interacting locally synchronized oscillations in neuronal networks.


Commun Nonlinear Sci Numer Simulat 17, 3922 (2012) (ISI, also time-resolved)




[20] Wildie M, Shanahan M:


Establishing communication between neuronal populations through competitive entrainment.


Front Comp Neurosci 5, 62 (2012) (multivariate ISI-diversity)




[19] Qu J, Wang R, Du Y, Cao J:


Synchronization study in ring-like and grid-like neuronal networks.


Cogn Neurodyn 6, 21 (2012) (ISI, also multivariate)



[18] Spencer MC, Downes JH, Xydas D, Hammond MW, Becerra VM, Whalley BJ, Warwick K, Nasuto SJ:


Spatio-temporal dependencies in functional connectivity in rodent cortical cultures.


J Behavioral Robotics 2, 156 (2012) (old SPIKE)




[17] Lyttle D, Fellous JM:


A new similarity measure for spike trains: Sensitivity to bursts and periods of inhibition.


J Neurosci Methods 199, 296 (2011) (comparison of measures, includes ISI, shows ISI is a metric)




[16] Kreuz T:


Measures of spike train synchrony.


Scholarpedia 6(10), 11934 (2011) (ISI, SPIKE)




[15] Andrzejak RG, Kreuz T:


Characterizing unidirectional couplings between point processes and flows.


European Physics Letters 96, 50012 (2011) [PDF] (ISI)




[14] Kreuz T, Chicharro D, Greschner M, Andrzejak RG:


Time-resolved and time-scale adaptive measures of spike train synchrony.


J Neurosci Methods 195, 92 (2011) [PDF] (introduces SPIKE-old)




[13] Njap F, Claussen JC, Moser A, Hofmann UG:


Comparing Realistic Subthalamic Nucleus Neuron Models.


AIP Conference Proceedings 1371, 102 (2010) (ISI)




[12] Engelmann J, Gertz S, Goulet J, Schuh A, von der Emde G:


Coding of Stimuli by Ampullary Afferents in Gnathonemus petersii.


J Neurophysiol 104, 1955 (2010) (ISI)



[11] Dodla R and Wilson CJ:


Quantification of Clustering in Joint Interspike Interval Scattergrams of Spike Trains.


Biophysical Journal 98, 2535 (2010) (variation of ISI)




[10] Xiao Z, Tian X:


Neuronal Ensemble Coding of Spike Trains in the Hippocampus CA3 via Small-world Network


J Computers 5, 448 (2010) (ISI, also time-resolved)




[9] Ibarz JM, Foffani G, Cid E, Inostroza M and de la Prida LM:


Emergent Dynamics of Fast Ripples in the Epileptic Hippocampus.


J Neurosci, 30, 16249 (2010) (multivariate ISI)




[8] Haas JS*, Kreuz T*, Torcini A, Politi A, Abarbanel HDI:


Rate maintenance and resonance in the entorhinal cortex.


Eur J Neurosci 32, 1930 (2010) [PDF] (ISI)



[7] Du Y, Lu Q:


Noise effects on temperature encoding of neuronal spike trains in a cold receptor.


Chin. Phys. Lett. 27, 020503 (2010) (ISI, also time-resolved)




[6] Du Y, Lu Q, Wang R:


Using interspike intervals to quantify noise effects on spike trains in temperature encoding neurons.


Cognitive Neurodynamics 4, 199 (2010) (ISI, also time-resolved)




[5] Dodla R and Wilson CJ:


Asynchronous response of coupled pacemaker neurons.


Phys Rev Lett 102, 068102 (2009) (ISI)




[4] Pfeiffer K, French AS:


GABAergic excitation of spider mechanoreceptors increases information capacity by increasing entropy rather than decreasing jitter.


J Neurosci 29, 10989 (2009) (ISI)



[3] Kreuz T, Chicharro D, Andrzejak RG, Haas JS, Abarbanel HDI:


Measuring multiple spike train synchrony.


J Neurosci Methods 183, 287 (2009) [PDF] (introduces multivariate ISI)




[2] Escobar MJ, Masson GS, Vieville T, Kornprobst P:


Action recognition using a bio-inspired feedforward spiking network.


Int J Comput Vis 82, 284 (2009) (ISI)




[1] Kreuz T, Haas JS, Morelli A, Abarbanel HDI, Politi A:


Measuring spike train synchrony.

J Neurosci Methods 165, 151 (2007) [PDF] (introduces ISI)


============================================================================


A PhD thesis outside of neuroscience:

Williams MJ:

Periodic patterns in human mobility

PhD Thesis, Cardiff University (2013). (multivariate ISI-diversity)